Gene description for CD9
Gene name	CD9 molecule
Gene symbol	CD9
Other names/aliases	BTCC-1 DRAP-27 MIC3 MRP-1 TSPAN-29 TSPAN29
Species	Homo sapiens
Experiment description of studies that identified CD9 in Serum
1 Experiment ID 111 Identified molecule protein Extracellular vesicle type Exosomes MISEV EVs Identification method Western blotting PubMed ID 21601258    Organism Homo sapiens Experiment description Loss of EpCAM expression in breast cancer derived serum exosomes: Role of proteolytic cleavage. Authors Rupp AK, Rupp C, Keller S, Brase JC, Ehehalt R, Fogel M, Moldenhauer G, Marmé, Sün H, Altevogt P. Journal name GO Publication year 2011 Sample Serum Sample name Serum - breast cancer Isolation/purification methods Differential centrifugation Sucrose density gradient Immunobeads (CD24) Flotation density - Molecules identified in the study Protein miRNA Methods used in the study Western blotting EV-TRACK EV110020: EV-METRIC:13%, 63%, 50%
2 Experiment ID 112 Identified molecule protein Extracellular vesicle type Exosomes MISEV EVs Identification method Western blotting PubMed ID 21601258    Organism Homo sapiens Experiment description Loss of EpCAM expression in breast cancer derived serum exosomes: Role of proteolytic cleavage. Authors Rupp AK, Rupp C, Keller S, Brase JC, Ehehalt R, Fogel M, Moldenhauer G, Marmé, Sün H, Altevogt P. Journal name GO Publication year 2011 Sample Serum Sample name Serum - Normal Isolation/purification methods Differential centrifugation Sucrose density gradient Flotation density - Molecules identified in the study Protein miRNA Methods used in the study Western blotting EV-TRACK EV110020: EV-METRIC:13%, 63%, 50%
3 Experiment ID 965 Identified molecule protein Extracellular vesicle type Exosomes MISEV EVs Identification method Western blotting PubMed ID 25844599    Organism Homo sapiens Experiment description Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel. Authors Kharaziha P, Chioureas D, Rutishauser D, Baltatzis G, Lennartsson L, Fonseca P, Azimi A, Hultenby K, Zubarev R, UlléA, Yachnin J, Nilsson S, Panaretakis T. Journal name Oncotarget Publication year 2015 Sample Serum Sample name castration resistant prostate cancer patient - R1 Isolation/purification methods Differential centrifugation Ultracentrifugation Density gradient centrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting EV-TRACK EV150027: EV-METRIC:11%, 56%
4 Experiment ID 966 Identified molecule protein Extracellular vesicle type Exosomes MISEV EVs Identification method Western blotting PubMed ID 25844599    Organism Homo sapiens Experiment description Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel. Authors Kharaziha P, Chioureas D, Rutishauser D, Baltatzis G, Lennartsson L, Fonseca P, Azimi A, Hultenby K, Zubarev R, UlléA, Yachnin J, Nilsson S, Panaretakis T. Journal name Oncotarget Publication year 2015 Sample Serum Sample name castration resistant prostate cancer patient - R2 Isolation/purification methods Differential centrifugation Ultracentrifugation Density gradient centrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting EV-TRACK EV150027: EV-METRIC:11%, 56%
5 Experiment ID 967 Identified molecule protein Extracellular vesicle type Exosomes MISEV EVs Identification method Western blotting PubMed ID 25844599    Organism Homo sapiens Experiment description Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel. Authors Kharaziha P, Chioureas D, Rutishauser D, Baltatzis G, Lennartsson L, Fonseca P, Azimi A, Hultenby K, Zubarev R, UlléA, Yachnin J, Nilsson S, Panaretakis T. Journal name Oncotarget Publication year 2015 Sample Serum Sample name castration resistant prostate cancer patient - R3 Isolation/purification methods Differential centrifugation Ultracentrifugation Density gradient centrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting EV-TRACK EV150027: EV-METRIC:11%, 56%
6 Experiment ID 970 Identified molecule protein Extracellular vesicle type Exosomes MISEV EVs Identification method Western blotting PubMed ID 25844599    Organism Homo sapiens Experiment description Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel. Authors Kharaziha P, Chioureas D, Rutishauser D, Baltatzis G, Lennartsson L, Fonseca P, Azimi A, Hultenby K, Zubarev R, UlléA, Yachnin J, Nilsson S, Panaretakis T. Journal name Oncotarget Publication year 2015 Sample Serum Sample name castration resistant prostate cancer patient - S6 Isolation/purification methods Differential centrifugation Ultracentrifugation Density gradient centrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting EV-TRACK EV150027: EV-METRIC:11%, 56%
7 Experiment ID 1203 Identified molecule protein Extracellular vesicle type Exosomes MISEV EVs Identification method Western blotting PubMed ID 27780738    Organism Homo sapiens Experiment description Next-generation sequencing-based small RNA profiling of cerebrospinal fluid exosomes. Authors Yagi Y, Ohkubo T, Kawaji H, Machida A, Miyata H, Goda S, Roy S, Hayashizaki Y, Suzuki H, Yokota T. Journal name Neurosci Lett. Publication year 2017 Sample Serum Sample name Healthy donor 1 Isolation/purification methods Differential centrifugation Ultracentrifugation Flotation density - Molecules identified in the study miRNA Methods used in the study Next generation sequencing EV-TRACK -
8 Experiment ID 1501 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV Small EVs Identification method Western blotting PubMed ID 33953168    Organism Homo sapiens Experiment description Mastocytosis-derived extracellular vesicles deliver miR-23a and miR-30a into pre-osteoblasts and prevent osteoblastogenesis and bone formation Authors Kim DK, Bandara G, Cho YE, Komarow HD, Donahue DR, Karim B, Baek MC, Kim HM, Metcalfe DD, Olivera A. Journal name Nat Commun Publication year 2021 Sample Serum Sample name Healthy volunteers Isolation/purification methods ExoQuick Kit Flotation density - Molecules identified in the study Protein miRNA Methods used in the study Western blotting qRT-PCR EV-TRACK -
9 Experiment ID 1502 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV Small EVs Identification method Western blotting PubMed ID 33953168    Organism Homo sapiens Experiment description Mastocytosis-derived extracellular vesicles deliver miR-23a and miR-30a into pre-osteoblasts and prevent osteoblastogenesis and bone formation Authors Kim DK, Bandara G, Cho YE, Komarow HD, Donahue DR, Karim B, Baek MC, Kim HM, Metcalfe DD, Olivera A. Journal name Nat Commun Publication year 2021 Sample Serum Sample name Systemic mastocytosis patients - Tryptase <110 ng/mL Isolation/purification methods ExoQuick Kit Flotation density - Molecules identified in the study Protein miRNA Methods used in the study Western blotting qRT-PCR EV-TRACK -
10 Experiment ID 1503 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV Small EVs Identification method Western blotting PubMed ID 33953168    Organism Homo sapiens Experiment description Mastocytosis-derived extracellular vesicles deliver miR-23a and miR-30a into pre-osteoblasts and prevent osteoblastogenesis and bone formation Authors Kim DK, Bandara G, Cho YE, Komarow HD, Donahue DR, Karim B, Baek MC, Kim HM, Metcalfe DD, Olivera A. Journal name Nat Commun Publication year 2021 Sample Serum Sample name Systemic mastocytosis patients - Tryptase >110 ng/mL Isolation/purification methods ExoQuick Kit Flotation density - Molecules identified in the study Protein miRNA Methods used in the study Western blotting qRT-PCR EV-TRACK -
11 Experiment ID 1504 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV Small EVs Identification method Western blotting PubMed ID 33953168    Organism Homo sapiens Experiment description Mastocytosis-derived extracellular vesicles deliver miR-23a and miR-30a into pre-osteoblasts and prevent osteoblastogenesis and bone formation Authors Kim DK, Bandara G, Cho YE, Komarow HD, Donahue DR, Karim B, Baek MC, Kim HM, Metcalfe DD, Olivera A. Journal name Nat Commun Publication year 2021 Sample Serum Sample name Healthy volunteers - Pooled Isolation/purification methods Centrifugation Filtration Iodixanol density gradient centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting EV-TRACK -
12 Experiment ID 1505 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV Small EVs Identification method Western blotting PubMed ID 33953168    Organism Homo sapiens Experiment description Mastocytosis-derived extracellular vesicles deliver miR-23a and miR-30a into pre-osteoblasts and prevent osteoblastogenesis and bone formation Authors Kim DK, Bandara G, Cho YE, Komarow HD, Donahue DR, Karim B, Baek MC, Kim HM, Metcalfe DD, Olivera A. Journal name Nat Commun Publication year 2021 Sample Serum Sample name Systemic mastocytosis patients - Tryptase <110 ng/mL - Pooled Isolation/purification methods Centrifugation Filtration Iodixanol density gradient centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting EV-TRACK -
13 Experiment ID 1506 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV Small EVs Identification method Western blotting PubMed ID 33953168    Organism Homo sapiens Experiment description Mastocytosis-derived extracellular vesicles deliver miR-23a and miR-30a into pre-osteoblasts and prevent osteoblastogenesis and bone formation Authors Kim DK, Bandara G, Cho YE, Komarow HD, Donahue DR, Karim B, Baek MC, Kim HM, Metcalfe DD, Olivera A. Journal name Nat Commun Publication year 2021 Sample Serum Sample name Systemic mastocytosis patients - Tryptase >110 ng/mL - Pooled Isolation/purification methods Centrifugation Filtration Iodixanol density gradient centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting EV-TRACK -
14 Experiment ID 1509 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV Small EVs Identification method Western blotting PubMed ID 33953168    Organism Homo sapiens Experiment description Mastocytosis-derived extracellular vesicles deliver miR-23a and miR-30a into pre-osteoblasts and prevent osteoblastogenesis and bone formation Authors Kim DK, Bandara G, Cho YE, Komarow HD, Donahue DR, Karim B, Baek MC, Kim HM, Metcalfe DD, Olivera A. Journal name Nat Commun Publication year 2021 Sample Serum Sample name Systemic mastocytosis patients - Fraction 3 Isolation/purification methods Centrifugation Filtration Iodixanol density gradient centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting EV-TRACK -
15 Experiment ID 1510 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV Small EVs Identification method Western blotting PubMed ID 33953168    Organism Homo sapiens Experiment description Mastocytosis-derived extracellular vesicles deliver miR-23a and miR-30a into pre-osteoblasts and prevent osteoblastogenesis and bone formation Authors Kim DK, Bandara G, Cho YE, Komarow HD, Donahue DR, Karim B, Baek MC, Kim HM, Metcalfe DD, Olivera A. Journal name Nat Commun Publication year 2021 Sample Serum Sample name Systemic mastocytosis patients - Fraction 4 Isolation/purification methods Centrifugation Filtration Iodixanol density gradient centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting EV-TRACK -
16 Experiment ID 1511 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV Small EVs Identification method Western blotting PubMed ID 33953168    Organism Homo sapiens Experiment description Mastocytosis-derived extracellular vesicles deliver miR-23a and miR-30a into pre-osteoblasts and prevent osteoblastogenesis and bone formation Authors Kim DK, Bandara G, Cho YE, Komarow HD, Donahue DR, Karim B, Baek MC, Kim HM, Metcalfe DD, Olivera A. Journal name Nat Commun Publication year 2021 Sample Serum Sample name Systemic mastocytosis patients - Fraction 5 Isolation/purification methods Centrifugation Filtration Iodixanol density gradient centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting EV-TRACK -
17 Experiment ID 1512 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV Small EVs Identification method Western blotting PubMed ID 33953168    Organism Homo sapiens Experiment description Mastocytosis-derived extracellular vesicles deliver miR-23a and miR-30a into pre-osteoblasts and prevent osteoblastogenesis and bone formation Authors Kim DK, Bandara G, Cho YE, Komarow HD, Donahue DR, Karim B, Baek MC, Kim HM, Metcalfe DD, Olivera A. Journal name Nat Commun Publication year 2021 Sample Serum Sample name Systemic mastocytosis patients - Fraction 6 Isolation/purification methods Centrifugation Filtration Iodixanol density gradient centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting EV-TRACK -
18 Experiment ID 2007 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV EVs Identification method Flow cytometry PubMed ID 35979935    Organism Homo sapiens Experiment description Serum-derived extracellular vesicles: Novel biomarkers reflecting the disease severity of COVID-19 patients Authors Tertel T, Tomić S, Đokić J, Radojević D, Stevanović D, Ilić N, Giebel B, Kosanović M. Journal name J Extracell Vesicles Publication year 2022 Sample Serum Sample name Healthy donors Isolation/purification methods Differential centrifugation Flotation density - Molecules identified in the study Protein Lipid Methods used in the study Flow cytometry EV-TRACK -
19 Experiment ID 2008 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV EVs Identification method Flow cytometry PubMed ID 35979935    Organism Homo sapiens Experiment description Serum-derived extracellular vesicles: Novel biomarkers reflecting the disease severity of COVID-19 patients Authors Tertel T, Tomić S, Đokić J, Radojević D, Stevanović D, Ilić N, Giebel B, Kosanović M. Journal name J Extracell Vesicles Publication year 2022 Sample Serum Sample name Severe COVID-19 patients Isolation/purification methods Differential centrifugation Flotation density - Molecules identified in the study Protein Lipid Methods used in the study Flow cytometry EV-TRACK -
20 Experiment ID 2009 Identified molecule protein Extracellular vesicle type Extracellular vesicles MISEV EVs Identification method Flow cytometry PubMed ID 35979935    Organism Homo sapiens Experiment description Serum-derived extracellular vesicles: Novel biomarkers reflecting the disease severity of COVID-19 patients Authors Tertel T, Tomić S, Đokić J, Radojević D, Stevanović D, Ilić N, Giebel B, Kosanović M. Journal name J Extracell Vesicles Publication year 2022 Sample Serum Sample name Mild COVID-19 patients Isolation/purification methods Differential centrifugation Flotation density - Molecules identified in the study Protein Lipid Methods used in the study Flow cytometry EV-TRACK -